How can I select the appropriate single-cell product for my study?

Research Objective

Recommended Product

Key Limitations

Gene expression profiling (fresh or frozen samples)

SeekOne DD 3' scRNA-seq

Not compatible with FFPE samples

Combined T/B cell clonality and transcriptome profiling

SeekOne DD 5' scRNA-seq + V(D)J

For immune profiling, only supports human/mouse primers; not compatible with nuclei samples

Full-length transcript coverage, mutation detection, alternative splicing, and lncRNA analysis

SeekOne DD scFAST-seq (full-length)

rRNA blocker currently supports only human and mouse

FFPE (formalin-fixed paraffin-embedded) samples

SeekOne DD scMLPSeq

Gene coverage is limited by probe panel design; currently supports human only

Chromatin accessibility and transcriptome (multi-omics)

SeekOne DD Multiome ATAC + RNA

Requires nuclei input; fresh samples are recommended

DNA methylation and transcriptome (multi-omics)

SeekOne DD Multiome Methylation + RNA

Requires relatively high sequencing depth

Spatial transcriptomics (true single-cell resolution)

SeekSpace scSpatial-seq

Requires OCT-embedded fresh frozen sections; FFPE is not supported