SEEKGENE
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SeekOne DD
SeekSpace
Sample Handling
Instruments
Analysis Software

scMethyl + RNA-seq

Simultaneous single-cell methylation and RNA profiling at single-base resolution for integrated epigenetic and transcriptional insights.

scATAC + RNA-seq

Matched chromatin accessibility and gene expression from the same nucleus for integrated multi-omic insights.

FFPE scRNA-seq

Dual de-crosslinking and dual reverse transcription improve RNA recovery and coverage for archived FFPE samples.

scFAST-seq

Random-primed single-cell RNA sequencing achieving uniform, near full-length coverage and broad RNA compatibility.

5' + Immune Profiling

Simultaneous profiling of transcriptome and immune repertoire for precise clonotype tracking and immune diversity analysis.

3'scRNA-seq

High-throughput single-cell RNA profiling for precise cellular state and gene expression analysis.

scMethyl + RNA-seq
scMethyl + RNA-seq
Simultaneous single-cell methylation and RNA profiling at single-base resolution for integrated epigenetic and transcriptional insights.
scATAC + RNA-seq
scATAC + RNA-seq
Matched chromatin accessibility and gene expression from the same nucleus for integrated multi-omic insights.
FFPE scRNA-seq
FFPE scRNA-seq
Dual de-crosslinking and dual reverse transcription improve RNA recovery and coverage for archived FFPE samples.
scFAST-seq
scFAST-seq
Random-primed single-cell RNA sequencing achieving uniform, near full-length coverage and broad RNA compatibility.
5' + Immune Profiling
5' + Immune Profiling
Simultaneous profiling of transcriptome and immune repertoire for precise clonotype tracking and immune diversity analysis.
3'scRNA-seq
3'scRNA-seq
High-throughput single-cell RNA profiling for precise cellular state and gene expression analysis.

Spatial-seq

True single-nucleus spatial transcriptomics combining spatial localization and gene expression from the same tissue slice.

Spatial-seq
Spatial-seq
True single-nucleus spatial transcriptomics combining spatial localization and gene expression from the same tissue slice.

Tissue Dissociation

Universal enzymatic dissociation solution optimized for human and mouse tissues, delivering high-yield, high-viability single cells for sequencing and cell-based assays.

FFPE Dissociation

Dedicated nuclei preparation kit designed for FFPE tissues, optimized for compatibility with SeekOne™ FFPE RNA and MLPSeq workflows.

AO/PI Staining

Dual-fluorescence viability dye compatible with the SeekMate Tinitan™ fluorescence cell counter.

Cell Counter Chip

Six Samples. One Chip. Reliable Results.

Tissue Dissociation
Tissue Dissociation
Universal enzymatic dissociation solution optimized for human and mouse tissues, delivering high-yield, high-viability single cells for sequencing and cell-based assays.
FFPE Dissociation
FFPE Dissociation
Dedicated nuclei preparation kit designed for FFPE tissues, optimized for compatibility with SeekOne™ FFPE RNA and MLPSeq workflows.
AO/PI Staining
AO/PI Staining
Dual-fluorescence viability dye compatible with the SeekMate Tinitan™ fluorescence cell counter.
Cell Counter Chip
Cell Counter Chip
Six Samples. One Chip. Reliable Results.

Digital Droplet System

A high-throughput, automated single-cell multi-omics platform based on microfluidic water-in-oil technology for single cell/nucleus separation and barcoding.

Cell Counter

Accurate, Fast & Cost-Efficient: Compact Cell Counter for Brightfield & Fluorescence Imaging.

Digital Droplet System
Digital Droplet System
A high-throughput, automated single-cell multi-omics platform based on microfluidic water-in-oil technology for single cell/nucleus separation and barcoding.
Cell Counter
Cell Counter
Accurate, Fast & Cost-Efficient: Compact Cell Counter for Brightfield & Fluorescence Imaging.

SeekSoul Online

Cloud-based platform for single-cell multi-omic data analysis and visualization — zero code, full workflow, accessible anywhere.

SeekSoul Tools

Comprehensive software suite for processing SeekOne™ single-cell transcriptome data, covering RNA, full-length, FFPE, and immune repertoire analyses.

SeekSpace Tools

Dedicated analysis software for SeekSpace™ spatial transcriptomics, integrating single-nucleus expression profiling with precise spatial localization and visualization.

SeekArc Tools

Analysis toolkit for SeekOne™ Multiome ATAC + RNA data, integrating chromatin accessibility and transcriptome quantification for joint downstream analysis.

SeekSoul Online
SeekSoul Online
Cloud-based platform for single-cell multi-omic data analysis and visualization — zero code, full workflow, accessible anywhere.
SeekSoul Tools
SeekSoul Tools
Comprehensive software suite for processing SeekOne™ single-cell transcriptome data, covering RNA, full-length, FFPE, and immune repertoire analyses.
SeekSpace Tools
SeekSpace Tools
Dedicated analysis software for SeekSpace™ spatial transcriptomics, integrating single-nucleus expression profiling with precise spatial localization and visualization.
SeekArc Tools
SeekArc Tools
Analysis toolkit for SeekOne™ Multiome ATAC + RNA data, integrating chromatin accessibility and transcriptome quantification for joint downstream analysis.
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SEEKGENE
Product
SeekOne DD
scMethyl + RNA-seq
scATAC + RNA-seq
FFPE scRNA-seq
scFAST-seq
5' + Immune Profiling
3'scRNA-seq
SeekSpace
Spatial-seq
Sample Handling
Tissue Dissociation
FFPE Dissociation
AO/PI Staining
Cell Counter Chip
Instruments
Digital Droplet System
Cell Counter
Analysis Software
SeekSoul Online
SeekSoul Tools
SeekSpace Tools
SeekArc Tools
Resources
FAQ
Company
About SeekGene
News
Contact Us

Missing "rnaseq_qc_results.txt" File

Release date : Jan 27,2026

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  • If the software reports: "No such file or directory: '/outputpath/samplename/step2/STAR/rnaseq_qc_results.txt'",
    the qualimap step has failed. For versions 1.2.1 and earlier, unpack the software package after installation: source ./bin/activate ; ./bin/conda-unpack.

attachment:

Prev: Error: gene_biotype = re.search(r'(gene_type|gene_biotype|transcript_biotype|transcript_type) "(.*?)";', ids).group(2) AttributeError: 'NoneType' object has no attribute 'group'

Return List

Next: Error: stderr: samtools sort: failed to read header from '/outputpath/samplename/.test/test_1M_Aligned.out.bam'

Hot FAQ

Best practice for sequencing pooling and QC

Jan 27,2026

Zero Mitochondrial Ratio in Web Summary (Version 1.2.2)?

Jan 27,2026

Qualimap Files Not Generated

Jan 27,2026

Zero Expression of a Specific Gene in the Matrix

Jan 27,2026

Error: Failed to open file "/path/samplename_SortedByCoordinate.bam.tmp.1020.bam": Too many open files

Jan 27,2026

Error: gene_biotype = re.search(r'(gene_type|gene_biotype|transcript_biotype|transcript_type) "(.*?)";', ids).group(2) AttributeError: 'NoneType' object has no attribute 'group'

Jan 27,2026

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